Insertion junction: LMJ.RY0402.184756_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.184756
Chromosome:chromosome 3
Location:4693319
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g177700 NIT2 Transcription factor regulating nitrogen metabolism; (1 of 1) IPR001932//IPR003035 - PPM-type phosphatase domain // RWP-RK domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCCGCCGTTGTTGTAAGCCATCCCTGT
Internal bar code:GAGCAGGACAGCTCACGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1134
LEAP-Seq percent confirming:99.784
LEAP-Seq n confirming:3234
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACAAGGGTGGTGTCAAAAGC
Suggested primer 2:CAGTAGAGGGGTCGAAGCTG