Insertion junction: LMJ.RY0402.185366_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.185366
Chromosome:chromosome 9
Location:7154882
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGAGTCCGGCGGAGGAGGGCTGCTGGG
Internal bar code:TTGGGTGTACGGAGGCCCTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:534
LEAP-Seq percent confirming:92.9862
LEAP-Seq n confirming:875
LEAP-Seq n nonconfirming:66
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGCATGCCTGAGTGGACA
Suggested primer 2:GTGTGTGGCTTTTGTTGTGG