Insertion junction: LMJ.RY0402.185729_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.185729
Chromosome:chromosome 3
Location:1891625
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGGGGCAGGAGTCAGCCGGGCAGTGTT
Internal bar code:CCTCGGTTAACATAGAGGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:358
LEAP-Seq percent confirming:95.2381
LEAP-Seq n confirming:560
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAAGGGGGTAGGTATTCA
Suggested primer 2:ATGACTCACGTTGACCTCCC