Insertion junction: LMJ.RY0402.187864_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.187864
Chromosome:chromosome 8
Location:1711082
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre08.g365900 LHCSR1,LI818 (1 of 3) PTHR21649//PTHR21649:SF15 - CHLOROPHYLL A/B BINDING PROTEIN // SUBFAMILY NOT NAMED; Stress-related chlorophyll a/b binding protein 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAGAGGCACTTAGATGGCCTTGAGGT
Internal bar code:TCCTATCGTCGCTTACGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:384
LEAP-Seq percent confirming:99.3186
LEAP-Seq n confirming:583
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TCATCTTTCCGGGTTACAGC
Suggested primer 2:CTGAAGGACGACTACGAGCC