Gene: Cre08.g365900
Overview
| Common name: | LHCSR1,LI818 |
| Defline: | (1 of 3) PTHR21649//PTHR21649:SF15 - CHLOROPHYLL A/B BINDING PROTEIN // SUBFAMILY NOT NAMED; Stress-related chlorophyll a/b binding protein 1 |
| Description: | LI818r-1; involved in protection against UV-B and induced by UVR8; Low-CO2 and high-light inducible chlorophyll a/b binding protein; regulated by CCM1 [PMID: 15235119] |
| Synonyms: | LI818,g8574.t1,Cre08.g365900.t1.1 |
| Chromosome: | chromosome 8 |
Protein Localization
A plasmid for expressing Cre08.g365900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre08.g365900-Venus-3xFLAG
Imaged strain: CSI_LW08E3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.003706_1 | CLIP2.003706 | CDS | 80 | 6.1 |
| CLIP2.003706_2 | CLIP2.003706 | CDS | 80 | 6.1 |
| CLIP2.004037_1 | CLIP2.004037 | intron | 80 | 6.1 |
| CLIP2.004037_2 | CLIP2.004037 | intron | 80 | 6.1 |
| CLIP2.004670_1 | CLIP2.004670 | 3'UTR | 80 | 6.1 |
| CLIP2.004670_2 | CLIP2.004670 | 3'UTR | 80 | 6.1 |
| CLIP2.005484_1 | CLIP2.005484 | intron | 80 | 6.1 |
| CLIP2.005484_2 | CLIP2.005484 | intron | 80 | 6.1 |
| CLIP2.005489_1 | CLIP2.005489 | CDS | 80 | 6.1 |
| CLIP2.005489_2 | CLIP2.005489 | CDS | 80 | 6.1 |
| LMJ.RY0402.187864_1 | LMJ.RY0402.187864 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.187864_2 | LMJ.RY0402.187864 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR21649 PTHR21649:SF15 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0009765, GO:0016020 |
| Best arabidopsis TAIR name: | AT1G29930.1 |
| Best arabidopsis TAIR symbol: | AB140,CAB1,CAB140,LHCB1.3 |
| Best arabidopsis TAIR defline: | chlorophyll A/B binding protein 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.