Insertion junction: LMJ.RY0402.191736_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.191736
Chromosome:chromosome 5
Location:1944846
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g241635 (1 of 1) IPR012344//IPR014001//IPR027417 - Matrix protein, lentiviral and alpha-retroviral // Helicase superfamily 1/2, ATP-binding domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAACTGCAACCACGCAGAAGGTGAGCC
Internal bar code:GTGGCTTGGCGAGGCAAGAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:791
LEAP-Seq percent confirming:59.0741
LEAP-Seq n confirming:319
LEAP-Seq n nonconfirming:221
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGCGTAGTGATGGTGGTG
Suggested primer 2:CAGAGGCACGATGCAAGTAA