| Common name: | |
| Defline: | (1 of 1) IPR012344//IPR014001//IPR027417 - Matrix protein, lentiviral and alpha-retroviral // Helicase superfamily 1/2, ATP-binding domain // P-loop containing nucleoside triphosphate hydrolase |
| Description: | |
| Synonyms: | Cre24.g770500.t1.1,g5330.t1 |
| Chromosome: | chromosome 5 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.029474_1 | CLIP2.029474 | CDS | 80 | 6.1 |
| CLIP2.029474_2 | CLIP2.029474 | CDS | 80 | 6.1 |
| CLIP2.043932_1 | CLIP2.043932 | intron | 80 | 6.1 |
| CLIP2.043932_2 | CLIP2.043932 | intron | 80 | 6.1 |
| CLIP2.072000_1 | CLIP2.072000 | intron | 40 | 6.1 |
| CLIP2.073678_1 | CLIP2.073678 | 3'UTR | 63 | 6.1 |
| LMJ.RY0402.131943_1 | LMJ.RY0402.131943 | intron | 58 | 5.5 |
| LMJ.RY0402.187447_1 | LMJ.RY0402.187447 | intron | 73 | 5.5 |
| LMJ.RY0402.191736_1 | LMJ.RY0402.191736 | intron | 95 | 5.5 |
| LMJ.RY0402.191736_2 | LMJ.RY0402.191736 | intron | 95 | 5.5 |
| LMJ.RY0402.197668_1 | LMJ.RY0402.197668 | intron | 73 | 5.5 |
| LMJ.RY0402.205459_1 | LMJ.RY0402.205459 | intron | 95 | 5.5 |
| LMJ.RY0402.205459_2 | LMJ.RY0402.205459 | intron | 95 | 5.5 |
| LMJ.RY0402.221749_2 | LMJ.RY0402.221749 | intron | 73 | 5.5 |
| PFAM: | PF00271, PF00270 |
| PANTHER: | PTHR14074:SF4 PTHR14074 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0005198, GO:0019028 |
| Best arabidopsis TAIR name: | AT1G01040.2 |
| Best arabidopsis TAIR symbol: | ASU1,ATDCL1,CAF,DCL1,EMB60,EMB76,SIN1,SUS1 |
| Best arabidopsis TAIR defline: | dicer-like 1 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Paromomycin, screen 1 of 6 ( 95% confidence (FDR = 0.041)) |
| Paromomycin, screen 3 of 6 ( 71% confidence (FDR = 0.29)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.