Insertion junction: LMJ.RY0402.194412_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.194412
Chromosome:chromosome 11
Location:1007911
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467665 (1 of 1) IPR002909//IPR006626//IPR011050//IPR014756//IPR019316 - IPT domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor // Immunoglobulin E-set // G8 domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGAGCCGTCCATGCAAGGCGGTGTGAA
Internal bar code:TACGGTTCCAATCACTGGAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:722
LEAP-Seq percent confirming:99.7332
LEAP-Seq n confirming:1869
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCGGAACCATAACCCCT
Suggested primer 2:CGCCGTACAAGTTACGGTTT