Gene: Cre11.g467665

Overview

Common name:
Defline:(1 of 1) IPR002909//IPR006626//IPR011050//IPR014756//IPR019316 - IPT domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor // Immunoglobulin E-set // G8 domain
Description:
Synonyms:Cre18.g745650.t1.1,g11595.t1
Chromosome:chromosome 11

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.005381_4 CLIP2.005381 CDS 80 6.1
CLIP2.011839_1 CLIP2.011839 CDS 80 6.1
CLIP2.011839_2 CLIP2.011839 CDS 80 6.1
CLIP2.013523_3 CLIP2.013523 CDS 80 6.1
CLIP2.021807_1 CLIP2.021807 CDS 80 6.1
CLIP2.021807_2 CLIP2.021807 CDS 80 6.1
CLIP2.024603_1 CLIP2.024603 CDS 80 6.1
CLIP2.024603_2 CLIP2.024603 CDS 80 6.1
CLIP2.038632_1 CLIP2.038632 CDS 80 6.1
CLIP2.038632_2 CLIP2.038632 CDS 80 6.1
CLIP2.049753_1 CLIP2.049753 CDS 80 6.1
CLIP2.049753_2 CLIP2.049753 CDS 80 6.1
CLIP2.077824_3 CLIP2.077824 CDS 80 6.1
LMJ.RY0402.042573_1 LMJ.RY0402.042573 CDS 73 5.5
LMJ.RY0402.051332_1 LMJ.RY0402.051332 CDS 73 5.5
LMJ.RY0402.051781_1 LMJ.RY0402.051781 CDS 95 5.5
LMJ.RY0402.051781_2 LMJ.RY0402.051781 CDS 95 5.5
LMJ.RY0402.068640_1 LMJ.RY0402.068640 CDS 73 5.5
LMJ.RY0402.103403_2 LMJ.RY0402.103403 CDS 73 5.5
LMJ.RY0402.105485_1 LMJ.RY0402.105485 intron 73 5.5
LMJ.RY0402.110450_1 LMJ.RY0402.110450 3'UTR 73 5.5
LMJ.RY0402.116420_1 LMJ.RY0402.116420 3'UTR 95 5.5
LMJ.RY0402.116420_2 LMJ.RY0402.116420 3'UTR 95 5.5
LMJ.RY0402.127046_1 LMJ.RY0402.127046 intron 95 5.5
LMJ.RY0402.127046_2 LMJ.RY0402.127046 intron 95 5.5
LMJ.RY0402.148606_1 LMJ.RY0402.148606 CDS 95 5.5
LMJ.RY0402.148606_2 LMJ.RY0402.148606 CDS 95 5.5
LMJ.RY0402.177898_1 LMJ.RY0402.177898 CDS 95 5.5
LMJ.RY0402.177898_2 LMJ.RY0402.177898 CDS 95 5.5
LMJ.RY0402.189982_1 LMJ.RY0402.189982 CDS 95 5.5
LMJ.RY0402.189982_2 LMJ.RY0402.189982 CDS 95 5.5
LMJ.RY0402.194412_2 LMJ.RY0402.194412 intron 73 5.5
LMJ.RY0402.203532_1 LMJ.RY0402.203532 CDS 95 5.5
LMJ.RY0402.203532_2 LMJ.RY0402.203532 CDS 95 5.5
LMJ.RY0402.205092_1 LMJ.RY0402.205092 CDS 95 5.5
LMJ.RY0402.205092_2 LMJ.RY0402.205092 CDS 95 5.5
LMJ.RY0402.213477_1 LMJ.RY0402.213477 CDS 95 5.5
LMJ.RY0402.213477_2 LMJ.RY0402.213477 CDS 95 5.5
LMJ.RY0402.222806_1 LMJ.RY0402.222806 3'UTR 95 5.5
LMJ.RY0402.222806_2 LMJ.RY0402.222806 3'UTR 95 5.5
LMJ.RY0402.252629_1 LMJ.RY0402.252629 intron 95 5.5
LMJ.RY0402.252629_2 LMJ.RY0402.252629 intron 95 5.5

Gene Annotations

PFAM:PF01833, PF10162
PANTHER: PTHR15535
KEGG_ec:
KEGG_orthology:
KOG:KOG3544
Gene ontology terms::GO:0005515
Best arabidopsis TAIR name:AT1G49490.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Leucine-rich repeat (LRR) family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 5 of 6 ( 78% confidence (FDR = 0.22))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.