Insertion junction: LMJ.RY0402.222806_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.222806
Chromosome:chromosome 11
Location:978976
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467665 (1 of 1) IPR002909//IPR006626//IPR011050//IPR014756//IPR019316 - IPT domain // Parallel beta-helix repeat // Pectin lyase fold/virulence factor // Immunoglobulin E-set // G8 domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGTGCCGCATGGCGTGCATTGGGACAG
Internal bar code:GGAGAGGACTGGTGAAGCAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:579
LEAP-Seq percent confirming:84.1972
LEAP-Seq n confirming:666
LEAP-Seq n nonconfirming:125
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCTGGTTTGCAAGTACA
Suggested primer 2:ATGTATGGGGTCGAGCGTAG