Insertion junction: LMJ.RY0402.195292_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.195292
Chromosome:chromosome 9
Location:4546102
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g396139 (1 of 5) K14326 - regulator of nonsense transcripts 1 (UPF1, RENT1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCTCCTCGCTCTCCGCCCACTCCTCCTGC
Internal bar code:CAGAAGAACGTCACCGGGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:222
LEAP-Seq percent confirming:99.795
LEAP-Seq n confirming:3895
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTTCCCATCACTCCGTTCTC
Suggested primer 2:TGGTTAAGGGGGAGTAGGCT