Insertion junction: LMJ.RY0402.195991_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.195991
Chromosome:chromosome 9
Location:5946197
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g402775 VTC4,ROC81 (1 of 1) PF02656//PF03105//PF09359 - Domain of unknown function (DUF202) (DUF202) // SPX domain (SPX) // VTC domain (VTC); Polyphosphate Polymerase activity 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGGTTGTCTGGTTAGCGACCTGTGCTGA
Internal bar code:TACGCGCCTGCTCACCGCACAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1072
LEAP-Seq percent confirming:88.8482
LEAP-Seq n confirming:10915
LEAP-Seq n nonconfirming:1370
LEAP-Seq n unique pos:56

Suggested primers for confirmation by PCR

Suggested primer 1:CTGTCGCTGTTCTAGAGGGG
Suggested primer 2:GCAAGTTCAGAAGGACTGCC