Insertion junction: LMJ.RY0402.197050_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.197050
Chromosome:chromosome 3
Location:7478672
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205600 IoJAP,RSF1 (1 of 1) PTHR21043//PTHR21043:SF1 - IOJAP SUPERFAMILY ORTHOLOG // PROTEIN IOJAP, CHLOROPLASTIC; Putative chloroplast ribosome silencing factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGATGAAGGGACCAGCCCAAAAAGAGT
Internal bar code:ATTCAGGGGACAAGAACAAATG

Confirmation - LEAP-Seq

LEAP-Seq distance:605
LEAP-Seq percent confirming:99.575
LEAP-Seq n confirming:3280
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGGCGAGAAAGTCGATCA
Suggested primer 2:TTCCTCACACTGCTGTCCAC