Gene: Cre03.g205600
Overview
| Common name: | IoJAP,RSF1 |
| Defline: | (1 of 1) PTHR21043//PTHR21043:SF1 - IOJAP SUPERFAMILY ORTHOLOG // PROTEIN IOJAP, CHLOROPLASTIC; Putative chloroplast ribosome silencing factor |
| Description: | Bacterial RsfA inhibits ribosome subunit joining under stress, higher plant IoJAP is involved in plastid ribosome biogenesis |
| Synonyms: | IoJAP,Cre03.g205600.t1.1,g4200.t1 |
| Chromosome: | chromosome 3 |
Protein Localization
A plasmid for expressing Cre03.g205600 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre03.g205600-Venus-3xFLAG
Imaged strain: CSI_LW04H5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched around pyrenoid
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.007471_1 | CLIP2.007471 | CDS | 40 | 6.1 |
| LMJ.RY0402.100824_1 | LMJ.RY0402.100824 | intron | 73 | 5.5 |
| LMJ.RY0402.168653_1 | LMJ.RY0402.168653 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.168653_2 | LMJ.RY0402.168653 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.197050_1 | LMJ.RY0402.197050 | CDS | 95 | 5.5 |
| LMJ.RY0402.197050_2 | LMJ.RY0402.197050 | CDS | 95 | 5.5 |
| LMJ.RY0402.202267_1 | LMJ.RY0402.202267 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.202267_2 | LMJ.RY0402.202267 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.211407_2 | LMJ.RY0402.211407 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF02410 |
| PANTHER: | PTHR21043 PTHR21043:SF1 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT3G12930 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Lojap-related protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.