Insertion junction: LMJ.RY0402.202267_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202267
Chromosome:chromosome 3
Location:7481316
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g205600 IoJAP,RSF1 (1 of 1) PTHR21043//PTHR21043:SF1 - IOJAP SUPERFAMILY ORTHOLOG // PROTEIN IOJAP, CHLOROPLASTIC; Putative chloroplast ribosome silencing factor 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTATACGGTAAACCGGACACCCCGGCCGG
Internal bar code:CTTAACGGACACAAACCTATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:610
LEAP-Seq percent confirming:84.3148
LEAP-Seq n confirming:1489
LEAP-Seq n nonconfirming:277
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGACTTCCTGCTCACCT
Suggested primer 2:CAGGCGTGAAGGGTACAAAT