Insertion junction: LMJ.RY0402.197498_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.197498
Chromosome:chromosome 3
Location:4559386
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g176833 NAP1,NAP,DII5 (1 of 7) PF00022 - Actin (Actin); Novel actin protein 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAAAAGTGCGGCGAACGCCACGCCCTAACG
Internal bar code:AGGTGGTTTCCTGGCGCCCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:437
LEAP-Seq percent confirming:88.5851
LEAP-Seq n confirming:1296
LEAP-Seq n nonconfirming:167
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTGGGGTAGTCCAAAGCTCA
Suggested primer 2:ACACCGCATCATGTTCGTAA