Insertion junction: LMJ.RY0402.197772_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.197772
Chromosome:chromosome 2
Location:2001381
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g088400 DEG1,DEG1A (1 of 3) PTHR22939:SF81 - PROTEASE DO-LIKE 1, CHLOROPLASTIC; Deg protease 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACGACCTAGCTGCCTGTGAGAGAGCC
Internal bar code:GGCCCGTACTGAAAGGTTTTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:984
LEAP-Seq percent confirming:99.4854
LEAP-Seq n confirming:1740
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TATTAAGAAGGGCGTGTGGG
Suggested primer 2:GTGACTACGGAATGCGTGTG