Insertion junction: LMJ.RY0402.198186_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.198186
Chromosome:chromosome 5
Location:2766900
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g236950 SRH11 (1 of 1) K14440 - SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12] (SMARCAL1, HARP); SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGAGCAGACCGGGATGAGGGAGGG
Internal bar code:AATACGGATACTCTTTTGCAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:171
LEAP-Seq percent confirming:99.2231
LEAP-Seq n confirming:894
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTAATGACAACGCGTGGATG
Suggested primer 2:AAGTACCCGCATCAGTCACC