Insertion junction: LMJ.RY0402.198556_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.198556
Chromosome:chromosome 10
Location:1013339
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g425050 ROC59,ROC28 (1 of 1) K11807 - WD and tetratricopeptide repeats protein 1 (WDTC1); Rhythm Of Chloroplast 59 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGGTGTAAAAGGGCTAGCGCTGGAAAAA
Internal bar code:TTGGCCTCCAGACGCTTGGGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1111
LEAP-Seq percent confirming:97.5746
LEAP-Seq n confirming:2977
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGGTTGTCAGTGAGGGTT
Suggested primer 2:GTTGACGTTGACGTTGATGG