Insertion junction: LMJ.RY0402.200004_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.200004
Chromosome:chromosome 17
Location:3883411
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre17.g728250 (1 of 1) PF16908//PF16910 - Vacuolar sorting-associated protein 13, N-terminal (VPS13) // Repeating coiled region of VPS13 (VPS13_mid_rpt) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCAGTGCCACGCTGGCATGCCGCAGGCGC
Internal bar code:GAATATCAGGTATGCTCAAGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:686
LEAP-Seq percent confirming:63.1074
LEAP-Seq n confirming:1052
LEAP-Seq n nonconfirming:615
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAGGAACAGGCTACACA
Suggested primer 2:CTGCACTTCCCTCTCAGTCC