Insertion junction: LMJ.RY0402.202306_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.202306
Chromosome:chromosome 1
Location:4126247
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATCGGTAGCCCCTGGCTCCCTGGCTCCC
Internal bar code:CTGGGGCGAGAGGGGGAAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:329
LEAP-Seq percent confirming:5.34351
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:248
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:CTAAGGACGAACTGAAGCGG
Suggested primer 2:CCCCTGTCAGTCAAACACCT