Insertion junction: LMJ.RY0402.202306_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.202306
Chromosome:chromosome 1
Location:4126247
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCAAAAGGAGGCCGGAAGGATGTTGTTG
Internal bar code:CCACGGCATACACCAGCGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:196
LEAP-Seq percent confirming:31.8376
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:319
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTGTCAGTCAAACACCT
Suggested primer 2:CTAAGGACGAACTGAAGCGG