Insertion junction: LMJ.RY0402.202691_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.202691
Chromosome:chromosome 3
Location:6310976
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g193400 (1 of 2) PTHR30603 - RNA POLYMERASE SIGMA FACTOR RPO CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCGCGACGATGTGTGCTGCCGTCGCGTCG
Internal bar code:CAGCGCGACAGTGACGGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:858
LEAP-Seq percent confirming:99.2914
LEAP-Seq n confirming:1121
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCTTCGCCTTAAAATACC
Suggested primer 2:GCAAGTCGCCACCTCTACTC