Insertion junction: LMJ.RY0402.205015_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.205015
Chromosome:chromosome 9
Location:849341
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g401700 (1 of 1) PTHR16193:SF0 - TETRATRICOPEPTIDE REPEAT PROTEIN 27 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGAGGAGGCGGGGACAAAAAAACATAAAAC
Internal bar code:GATGGTACGGAATTTCAATTC

Confirmation - LEAP-Seq

LEAP-Seq distance:551
LEAP-Seq percent confirming:86.5331
LEAP-Seq n confirming:7473
LEAP-Seq n nonconfirming:1163
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:CTCTGTGCATGTGTGTGTGC
Suggested primer 2:CCATACACGCGTACGATCAC