Insertion junction: LMJ.RY0402.205352_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.205352
Chromosome:chromosome 7
Location:2127407
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre07.g326450 VPS5B (1 of 2) K17917 - sorting nexin-1/2 (SNX1_2); Subunit of Retromer complex intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACCCTTCCCTACCCCCCATTCCGCCACC
Internal bar code:AATGGGTTCTGCGTGGCCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:457
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGGTATCGGACTGTGGG
Suggested primer 2:TAGGGGTCCGAACTGTCAAG