Insertion junction: LMJ.RY0402.206700_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.206700
Chromosome:chromosome 4
Location:2268993
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g220200 (1 of 1) PTHR16254:SF13 - K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTACGCAAGCGATGCCAAGTCCAAAGAAC
Internal bar code:TCTTGAAACATCTGGCATGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:895
LEAP-Seq percent confirming:97.9957
LEAP-Seq n confirming:1369
LEAP-Seq n nonconfirming:28
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:AAGATATCCAAATTGGGGGC
Suggested primer 2:CATGAAACACTGCCCATGTC