Insertion junction: LMJ.RY0402.207184_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.207184
Chromosome:chromosome 6
Location:3139827
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre06.g275350 ROC40 (1 of 1) PTHR12802//PTHR12802:SF43 - SWI/SNF COMPLEX-RELATED // PROTEIN CCA1-RELATED; Rhythm Of Chloroplast 40 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTCCCTCCCTGCCTTTGGCTATAATCAA
Internal bar code:AAGGTAATTTGTTTCCTAAGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:380
LEAP-Seq percent confirming:96.0526
LEAP-Seq n confirming:803
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGCAATTTGCTTACCAT
Suggested primer 2:ATTTTGTGTGTTTGGCACGA