Insertion junction: LMJ.RY0402.211236_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.211236
Chromosome:chromosome 6
Location:4118947
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g278221 TSSP1,TPS1,TSPSP1 (1 of 1) 2.4.1.15//3.1.3.12 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase // Trehalose-phosphatase / Trehalose 6-phosphate phosphatase; Trehalose-6-phosphate synthase/phosphatase, class I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCATGGCATTGCATTACCAAATATATACT
Internal bar code:CCTTGTCGGCGTATGGAACCC

Confirmation - LEAP-Seq

LEAP-Seq distance:504
LEAP-Seq percent confirming:99.6569
LEAP-Seq n confirming:581
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGACGCATTGTTACACCA
Suggested primer 2:TTCTTTTGGCGCTGTTTTCT