Insertion junction: LMJ.RY0402.213456_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.213456
Chromosome:chromosome 17
Location:2363578
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre17.g714900 CGL11 Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACGATGTACCGGCCCCACCCTGCTTTG
Internal bar code:ACACGCAATTCTCTCGTCCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:98.5437
LEAP-Seq n confirming:203
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTGTTGCTGAAACGAGTG
Suggested primer 2:AACGTGACTACCCAGCATCC