Insertion junction: LMJ.RY0402.214478_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.214478
Chromosome:chromosome 10
Location:2589825
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g437150 PPR6,CYCR5 PentatricoPeptide Repeat protein 6; (1 of 2) K17710 - pentatricopeptide repeat domain-containing protein 1 (PTCD1) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTGCCACGCCCGAGGACTTATGCCCGCC
Internal bar code:CCCCGCGTCAGTGCGGCGGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAGTATCACACCATGCAC
Suggested primer 2:GAGCAGGTGTTCAGCATCAA