Insertion junction: LMJ.RY0402.214947_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.214947
Chromosome:chromosome 10
Location:2509575
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g436350 SHK5,SHKF1 (1 of 1) 2.7.1.71 - Shikimate kinase; Shikimate kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGATGCGCACCATGGATAGCCCCGCGGG
Internal bar code:GCCGACGATACAGAAAACGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:848
LEAP-Seq percent confirming:99.0129
LEAP-Seq n confirming:8125
LEAP-Seq n nonconfirming:81
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:ACTACTGCCTTGCCGTGACT
Suggested primer 2:GCATGGTCAGTTGTGTGGTC