Insertion junction: LMJ.RY0402.215234_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.215234
Chromosome:chromosome 1
Location:5923854
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g042200 PBA1,PBAS1 Photosystem II Associated Subunit 1 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCACTGTAAGCAACGAGTGACTCTGTGTA
Internal bar code:CATGGAGTTCCCAAGCGGCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:961
LEAP-Seq percent confirming:94.8799
LEAP-Seq n confirming:7542
LEAP-Seq n nonconfirming:407
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:TACGTAAACCTGGCCGTTTC
Suggested primer 2:ACAACTCCCAACCACCAGAG