Insertion junction: LMJ.RY0402.217623_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.217623
Chromosome:chromosome 11
Location:1332193
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre11.g467712 SAGA1 StArch Granules Abnormal 1; (1 of 3) IPR000104//IPR002044//IPR013784 - Antifreeze protein, type I // Carbohydrate binding module family 20 // Carbohydrate-binding-like fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGAGTTCTGGGTTCTGAAAGCGTAGGCG
Internal bar code:GAACTGACAGCAATGGCTCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:97.3348
LEAP-Seq n confirming:8984
LEAP-Seq n nonconfirming:246
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGGAGATGGATGCGAT
Suggested primer 2:GTCGTGCGAATTGGTTAGGT