Insertion junction: LMJ.RY0402.217911_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.217911
Chromosome:chromosome 1
Location:4129712
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGCACACACGCGCTGCAGCACACACTCC
Internal bar code:GCTTTTTAACACCGCACCTCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:923
LEAP-Seq percent confirming:99.7921
LEAP-Seq n confirming:3840
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGATATCAAATTGCGG
Suggested primer 2:TAGGACATGAGCAGGAGGCT