Insertion junction: LMJ.RY0402.217911_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.217911
Chromosome:chromosome 1
Location:4129717
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAAAGGTTGATCCTGTCCAGCCTAGGT
Internal bar code:AGGAGCAGCCGCCTCGGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1083
LEAP-Seq percent confirming:99.821
LEAP-Seq n confirming:4461
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCTGATATCAAATTGCGG
Suggested primer 2:TAGGACATGAGCAGGAGGCT