Insertion junction: LMJ.RY0402.222720_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.222720
Chromosome:chromosome 9
Location:4133469
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g393765 LMR1 (1 of 14) PF01476 - LysM domain (LysM); Predicted protein with LysM domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGAACACTGCATCTACTGCACACGCCC
Internal bar code:TGACTCAGGGGCTAGCCAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:99.6576
LEAP-Seq n confirming:5239
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCTGTCCGCGCTAGATATTC
Suggested primer 2:GATTGGAGCAGAGATCGAGG