Insertion junction: LMJ.RY0402.224080_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.224080
Chromosome:chromosome 2
Location:3380114
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g095102 VPS5C (1 of 4) PTHR10555:SF84 - SORTING NEXIN-8; Subunit of Retromer complex CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTTTCAGCGCGACGGCGGGGGCAGGCGA
Internal bar code:CGTCAGCCAGGAAGGAAGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:637
LEAP-Seq percent confirming:94.103
LEAP-Seq n confirming:2266
LEAP-Seq n nonconfirming:142
LEAP-Seq n unique pos:51

Suggested primers for confirmation by PCR

Suggested primer 1:TCGAGCTTTATGGAGGAGGA
Suggested primer 2:GGAGAAGCAGGAATGCTGAC