Insertion junction: LMJ.RY0402.225716_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.225716
Chromosome:chromosome 4
Location:3732585
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g229300 RCA1 (1 of 4) IPR003959//IPR027417 - ATPase, AAA-type, core // P-loop containing nucleoside triphosphate hydrolase; RuBisCO activase 1, chloroplastic 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAAACAACAAATGATGGTCCGGGGAACCA
Internal bar code:GCAGGGTATGTAGCGCGCGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:492
LEAP-Seq percent confirming:98.1662
LEAP-Seq n confirming:1713
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTGATCAAGTACGGCAAG
Suggested primer 2:GCCTGGAACACAAGTTGGAT