Insertion junction: LMJ.RY0402.226711_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.226711
Chromosome:chromosome 9
Location:542357
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g403900 FAP294 (1 of 5) PF13391 - HNH endonuclease (HNH_2); Coiled-Coil Flagellar Associated Protein 294 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGTGTTTGCTCCGGACTAAACACCTGCAG
Internal bar code:GGAGGTACATCGGCCCAGCCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:642
LEAP-Seq percent confirming:95.9184
LEAP-Seq n confirming:1128
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GGCAGCATAGCCTTGCTTAG
Suggested primer 2:GCAACACAACAGCAAGAGGA