Insertion junction: LMJ.RY0402.226871_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.226871
Chromosome:chromosome 12
Location:1358495
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre12.g488500 ARC6 Accumulation and replication of chloroplast; (1 of 2) PTHR33925//PTHR33925:SF3 - FAMILY NOT NAMED // PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 6, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGCTGCCGCGTACTCTGCGGACACCC
Internal bar code:ACGGGGTAGAGTGGTGGGGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:516
LEAP-Seq percent confirming:99.7862
LEAP-Seq n confirming:2800
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACACATGCTCTCCAAATCCC
Suggested primer 2:AGGACCCCATACTTCCATCC