Insertion junction: LMJ.RY0402.228940_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.228940
Chromosome:chromosome 16
Location:5258193
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g682550 (1 of 1) PF08016//PF08263//PF13855 - Polycystin cation channel (PKD_channel) // Leucine rich repeat N-terminal domain (LRRNT_2) // Leucine rich repeat (LRR_8) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAAAAATTTGCATAAGATGTTGGGCACTC
Internal bar code:GCGCGCCTGCGACATTCGTCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:627
LEAP-Seq percent confirming:98.96
LEAP-Seq n confirming:1237
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GTATGCTAGGAGCGGCTTTG
Suggested primer 2:AATCCATGACCCATCCGTTA