Insertion junction: LMJ.RY0402.228962_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.228962
Chromosome:chromosome 9
Location:7151104
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCCGGAGCAAGAAGCGACCTCGCGCG
Internal bar code:CCCTGCGCGTCCGCTAGCATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:345
LEAP-Seq percent confirming:84.6667
LEAP-Seq n confirming:254
LEAP-Seq n nonconfirming:46
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:CACGCATCCTTACCCTTCAT
Suggested primer 2:GGAGTGTTTGAAGCGAGGAC