Insertion junction: LMJ.RY0402.229313_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.229313
Chromosome:chromosome 1
Location:5049491
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g034900 CDPK5 (1 of 4) PTHR24347:SF138 - PROTEIN F32D8.1; Calcium/calmodulin-dependent protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTACGCAATAGGTGCAGGTGCCCACACCA
Internal bar code:TGCCATATCATTACCAAGTCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:118
LEAP-Seq percent confirming:99.361
LEAP-Seq n confirming:311
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCACTGTGATATCTGCCCCT
Suggested primer 2:TCTGAACTTTTGCGGGTCTT