Insertion junction: LMJ.RY0402.229399_3

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.229399
Chromosome:chromosome 13
Location:2248444
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre13.g578650 CPLD10,NUOAF5,HCF173 (1 of 1) PTHR10366//PTHR10366:SF343 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED; PSII biogenesis protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGAAAGGACCGGAGCGTAGAGCGCGCATG
Internal bar code:TGGAAAGGGGAGACTATATTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:778
LEAP-Seq percent confirming:98.8718
LEAP-Seq n confirming:5346
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TTGCACTGCGCTTCTAAAAA
Suggested primer 2:CAATGCCATGTATGAGCTGG