Insertion junction: LMJ.RY0402.229932_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.229932
Chromosome:chromosome 6
Location:5565131
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g285401 HLP1,FAP355 Histone-like Flagellar Associated protein; (1 of 1) PF00216 - Bacterial DNA-binding protein (Bac_DNA_binding) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTGCTGTACCTATCTCGAGTGGGCAATGC
Internal bar code:CACCTACTCGCCCGCGGCAGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:590
LEAP-Seq percent confirming:99.2582
LEAP-Seq n confirming:2810
LEAP-Seq n nonconfirming:21
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGTGCTTTCGGGTTCT
Suggested primer 2:CTGAGGCACCCAGCTAAGAC