Insertion junction: LMJ.RY0402.232302_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.232302
Chromosome:chromosome 3
Location:1896148
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCCGCAATCGAGTTGCCGTTCTAAGCCGC
Internal bar code:GGGCTTCAGGGATTATTTGACG

Confirmation - LEAP-Seq

LEAP-Seq distance:394
LEAP-Seq percent confirming:98.9176
LEAP-Seq n confirming:1645
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCGGGATTGTAGACTGGT
Suggested primer 2:GTAGCGTCGGTTTTGGTCAT