Insertion junction: LMJ.RY0402.234004_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.234004
Chromosome:chromosome 11
Location:2165001
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g469600 HDA9 (1 of 1) IPR000286//IPR002110//IPR020683//IPR023801 - Histone deacetylase superfamily // Ankyrin repeat // Ankyrin repeat-containing domain // Histone deacetylase domain; RPD3/HDA1 type histone deacetylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTCCTCAATCTCAGCCTGAGGACTCCTC
Internal bar code:AGGTTGCACGGGACGACCTTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:193
LEAP-Seq percent confirming:99.3076
LEAP-Seq n confirming:5450
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAAGGAGGAGGATGGGTC
Suggested primer 2:GGGTGTCTGTGGGACTGTCT