| Common name: | HDA9 |
| Defline: | (1 of 1) IPR000286//IPR002110//IPR020683//IPR023801 - Histone deacetylase superfamily // Ankyrin repeat // Ankyrin repeat-containing domain // Histone deacetylase domain; RPD3/HDA1 type histone deacetylase |
| Description: | Histone deacetylase. ChromoDB HDA3411 |
| Synonyms: | HDA9,g11787.t1,Cre11.g469600.t1.1 |
| Chromosome: | chromosome 11 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.027406_1 | CLIP2.027406 | intron | 80 | 6.1 |
| CLIP2.027406_2 | CLIP2.027406 | intron | 80 | 6.1 |
| CLIP2.055097_1 | CLIP2.055097 | intron | 80 | 6.1 |
| CLIP2.066631_1 | CLIP2.066631 | 5'UTR | 80 | 6.1 |
| CLIP2.066631_2 | CLIP2.066631 | 5'UTR | 80 | 6.1 |
| LMJ.RY0402.129040_1 | LMJ.RY0402.129040 | intron | 73 | 5.5 |
| LMJ.RY0402.179510_1 | LMJ.RY0402.179510 | intron | 95 | 5.5 |
| LMJ.RY0402.179510_2 | LMJ.RY0402.179510 | intron | 95 | 5.5 |
| LMJ.RY0402.210740_2 | LMJ.RY0402.210740 | intron | 58 | 5.5 |
| LMJ.RY0402.210740_3 | LMJ.RY0402.210740 | intron | 58 | 5.5 |
| LMJ.RY0402.211306_1 | LMJ.RY0402.211306 | CDS | 73 | 5.5 |
| LMJ.RY0402.225883_1 | LMJ.RY0402.225883 | intron | 73 | 5.5 |
| LMJ.RY0402.234004_1 | LMJ.RY0402.234004 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.240156_1 | LMJ.RY0402.240156 | CDS | 73 | 5.5 |
| PFAM: | PF00850, PF12796 |
| PANTHER: | PTHR10625 PTHR10625:SF102 |
| KEGG_ec: | EC:3.5.1.98 |
| KEGG_orthology: | K11407 |
| KOG: | KOG1342 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT5G61070 |
| Best arabidopsis TAIR symbol: | ATHDA5,HDA05,HDA5 |
| Best arabidopsis TAIR defline: | histone deacetylase of the RPD3/HDA1 superfamily 18 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.