Insertion junction: LMJ.RY0402.234812_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.234812
Chromosome:chromosome 1
Location:4127156
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCCCCACCATCTGTTACCACTGCCCTGGC
Internal bar code:GACCACCACGATTCGTAATTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:574
LEAP-Seq percent confirming:93.1776
LEAP-Seq n confirming:5545
LEAP-Seq n nonconfirming:406
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATCGTCAGGAGAAGGAG
Suggested primer 2:GTGAGAGCTGCGTGCTACTG