Insertion junction: LMJ.RY0402.237517_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.237517
Chromosome:chromosome 3
Location:7302899
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g206900 (1 of 1) IPR000719//IPR002290//IPR011009//IPR011989//IPR016024 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Armadillo-like helical // Armadillo-type fold 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGACGGACACTTGGTGGACTTGTGGTGG
Internal bar code:TTGACCGTTGCAAAGGAACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:896
LEAP-Seq percent confirming:99.4915
LEAP-Seq n confirming:4500
LEAP-Seq n nonconfirming:23
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGCACTGACGTTTCGTCTTC
Suggested primer 2:CATGGCCTCATCCTACTCGT